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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845400.1_cds_XP_016509335.1_22274
CDS Infomation

[gene=LOC107826816] [db_xref=GeneID:107826816] [protein=protein indeterminate-domain 5, chloroplastic-like] [protein_id=XP_016509335.1] [location=complement(join(49880..50145,50894..51603,54354..54753,55428..55557))] [gbkey=CDS]
Sequence

ATGAATATTCAACAGGAAGTTCTCCTTCAAAAGCAGCAATATTCTTTAGCTCCATCTTCA
TCTATGGTTCAAACTCAAGCTCAAGCTGCACCAACAAAGAAGAGAAGAAATCAACCTGGC
ACTACACCATATCCAGATGCAGAAGTGATAGCTTTATCACCAAAGACACTAATGGCAACA
AACAGATTCTTATGTGAGGTATGCAACAAAGGATTCCAAAGGGAACAAAACTTACAACTA
CACAGAAGAGGACACAATTTGCCTTGGAAACTAAAACAGAAGAATACAAAAGAAGTAGTA
AAACGCAAGGTCTATCTTTGTCCTGAAATCACATGTGTACACCATGAAACTTCCAGAGCA
TTAGGTGATCTCACTGGGATTAAAAAACATTACTTCAGAAAACATGGTGAGAAGAAATTC
AAGTGTGAGAAATGTTCCAAGAAATATGCAGTTCAGTCTGATTGGAAAGCTCATACAAAA
ACTTGTGGCACTCGTGAATATAAATGTGATTGTGGCACTATTTTCTCAAGGCGTGACAGT
TTCATCACACACAGAGCTTTTTGTGATGCCTTGGCTCAGGAAACTGCAAGAAATCCAGTA
CCAAATTTTAGCACAATTGGCAGCCATTTATATGGAAGTAATAGCAACATAAATTTAGGC
AACTTCTCCAAAATGCAGAATTCCACAATTTCTGATCAAAAATTGAGTTTGGGCAATACT
AATCACAACCTCATTGGTACATCCAATATTGGCTCAAGTACTAGTAATTCCTTTTTCTTT
CAAGAATCCAATCAAGATTATGCCAACATTAAACCAATCCATAGCCTAATGCAACTCCCA
AATTTTCACAACAACAATATGTTTAACCTCAACTTTTTCCAGAATAATGATGGCAATATC
AATTTGCCCAGTGGAATTTTGGGTGATCAAAATATTAGTTGTTCAATCCCTTCTCTCTAT
GGTTCACAAGTTCAGAACCATAATCTTAATAATACTACTTCTTCAGTTGCACCAATGTCA
GCCACTGCACTTCTTCAAAAGGCAGCTCAAATTGGATCTACTACAAGTAATATTAGCACT
ACTGCCTCATTGCTGAAAGCCTTTGGAAATAGTACTAATGGTGGTAATTCATCCTCTAGT
GGCACAAAATCTGATCATCAAGCTGTCAACTTTGGCGACATTTTCAGTGACCATAGTGAG
AACCACTTGCCTGAAATCAATGGCGAAGCCGGGAATTTCGGTCCGACCGGTGACATTGTG
AATGTTTTCAATGCTTATGGACATGACCAAAATGACTATGGAGGAGGATACAACAAAGCA
ACCAAGTTGAACTTTGAGCAGCAACAGCACCAATTACCACTACAGAAGAAACAGTTAACT
AGAGATTTCCTTGGAGTTGGAGAGATAGTAAGAAGAAGTATGAGTGGGGGATTTAGTAGC
CAAAGAGAGCAACAGCAACAACAGCAAAGCAAGCAGGGTTTTGCAAGTGCTGGAAATTTT
CAGTGA

Peptide Sequence

PEP ID

XP_016509335.1
PEP Infomation

PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Nicotiana tabacum]
Sequence

MNIQQEVLLQKQQYSLAPSSSMVQTQAQAAPTKKRRNQPGTTPYPDAEVIALSPKTLMAT
NRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEVVKRKVYLCPEITCVHHETSRA
LGDLTGIKKHYFRKHGEKKFKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTIFSRRDS
FITHRAFCDALAQETARNPVPNFSTIGSHLYGSNSNINLGNFSKMQNSTISDQKLSLGNT
NHNLIGTSNIGSSTSNSFFFQESNQDYANIKPIHSLMQLPNFHNNNMFNLNFFQNNDGNI
NLPSGILGDQNISCSIPSLYGSQVQNHNLNNTTSSVAPMSATALLQKAAQIGSTTSNIST
TASLLKAFGNSTNGGNSSSSGTKSDHQAVNFGDIFSDHSENHLPEINGEAGNFGPTGDIV
NVFNAYGHDQNDYGGGYNKATKLNFEQQQHQLPLQKKQLTRDFLGVGEIVRRSMSGGFSS
QREQQQQQQSKQGFASAGNFQ

Transcript Sequence

Gene sequence data has not been registered.